Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900923.1_cds_XP_016450928.1_45333
CDS Infomation

[gene=LOC107775688] [db_xref=GeneID:107775688] [protein=phosphoglucan phosphatase DSP4, amyloplastic-like isoform X2] [protein_id=XP_016450928.1] [location=join(46759..46784,46858..46927,48180..48224,49211..49313,49922..49998,50089..50165,50273..50353,51320..51452,53357..53416,53889..53945,54342..54437,54883..54942,55245..55352,55749..55880)] [gbkey=CDS]
Sequence

ATGAATTGCCTTCAGAATCTTCCCAGATCCTCTGGTTTATCACTGAGAAACTTCACAGGC
ACTACAAAAAAGCCTTATTTCCCCGTTGTTTCACTGGGGATGACAAAATTTGCTGATCAG
CGTCTAAGTATTGTGGCACAGGTTGTATCTGGTTCTGAATCTAGTACAGAGAAGGGTGAA
ACAGAGAAGGATGCAGGAAAATCTGATACATACAGCAATGACATGACTGCAGCCATGGGA
GCTGTTTTAACCTATAGGCATGAGTTAGGAATGAACTACAACTTCATCCGTCCAGATTTG
ATTGTTGGGTCATGTCTACAGACTCCTGAGGATGTGGACAAGCTTCGCAGCATTGGAGTA
AAAACTATTTTTTGCTTGCAGCAAAATCCAGATCTCGAATATTTTGGGGTTGATATTGGT
GCAATTCGTGAATATGTCAACAAATGCAGTGATATTGAACACTTGCGTGCCGAAATAAGG
GATTTTGATGCATTTGATTTGAGGTTGCGGCTTCCAGCTGTCGTAAGCAAACTGAGCAAG
GCCGTCAATAGAAATGGGGGTGTGACTTACATACATTGCACCGCTGGACTTGGCAGAGCT
CCGGCAGTTGCGTTGACATATATGTTCTGGGTTCAAGGCTATAAGCTTGGTGAAGCTTTC
AATTTACTCATGAGCAAGCGCTCCTGCTTTCCAAAACTAGATGCCATCAAAAGTGCCACA
GCAGACATTCTTACAGGCCTTAAAAGGAAGCCTGCCACATTGACATGGTCTGGTGATGAT
TGTAGTACAGTGGAAATATCTGGACTTGATATTGGCTGGGGCCAGAGAATATCCTTGGAA
TTTGATGAGGAACGAGGTTTGTGGACTCTCCAGAGGGATTTGCCTGAAGGACACTATGAA
TACAAGTACATTGTTGATGGTGTATGGACATGCAATGAATTTGAGCCCATCACTTCTCCC
AACAAAGATGGACATATCAACAACTATGTAAAGGTTCTTGACGACAATCCAGACAGCATC
AGTGCAGCAGTTCGGAATAGGCTCACTAGTGATGACCCTGATCTTACTTCAGACGAAAGG
CTAATAATTAGGGAATTTCTTGAAGCTTATCCAGACGAAGAATGA

Peptide Sequence

PEP ID

XP_016450928.1
PEP Infomation

PREDICTED: phosphoglucan phosphatase DSP4, amyloplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MNCLQNLPRSSGLSLRNFTGTTKKPYFPVVSLGMTKFADQRLSIVAQVVSGSESSTEKGE
TEKDAGKSDTYSNDMTAAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGV
KTIFCLQQNPDLEYFGVDIGAIREYVNKCSDIEHLRAEIRDFDAFDLRLRLPAVVSKLSK
AVNRNGGVTYIHCTAGLGRAPAVALTYMFWVQGYKLGEAFNLLMSKRSCFPKLDAIKSAT
ADILTGLKRKPATLTWSGDDCSTVEISGLDIGWGQRISLEFDEERGLWTLQRDLPEGHYE
YKYIVDGVWTCNEFEPITSPNKDGHINNYVKVLDDNPDSISAAVRNRLTSDDPDLTSDER
LIIREFLEAYPDEE

Transcript Sequence

Gene sequence data has not been registered.